CDS

Accession Number TCMCG057C23129
gbkey CDS
Protein Id XP_018432776.1
Location join(4155120..4155371,4155455..4155535,4155613..4155678,4155768..4155857,4156005..4156137,4156269..4156387,4156470..4156537,4156644..4156692,4156795..4157792,4157984..4157987)
Gene LOC108805273
GeneID 108805273
Organism Raphanus sativus

Protein

Length 619aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018577274.1
Definition PREDICTED: probable U3 small nucleolar RNA-associated protein 7 isoform X2 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category A
Description U3 small nucleolar RNA-associated protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14768        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000462        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005732        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0030490        [VIEW IN EMBL-EBI]
GO:0030515        [VIEW IN EMBL-EBI]
GO:0030684        [VIEW IN EMBL-EBI]
GO:0030686        [VIEW IN EMBL-EBI]
GO:0032040        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0042274        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGATTTGCTATTTCTTTCGTAAAACCCTAAAAAATTACACAAAACCCTCAAAGTCAGTCCAATCAGCGCAGGTTCGATGTCGGAGCTCTTCCTCAATTAACACGTTATATATTTCTGCTAAAACCCTCTTAAAATCTCCACCGTCGTGTGTCGTTGTTTCTGAACTTTCCTCAGCGCCGCCGTCTCCAAATCTCAAAGCTCACAACGCCTCTCAGGTGAAGATAATTCAAAAGTTTCAATCTTTCTCTCAGGTTACAAAGGGAATCAAGATGGAGGTCGCTTTAGAGGATAACAATCTCATGGAGAAGGTGGTATTGACTCCTGATGAGCAGGAGATGGATGTTGAGTTGGAGGCTAAAGAGAAGAAGTATCTAAGAGGAGAAGGTGCTAATCTAGAGACGTTGAAGGACAAGAAGCTAAAGACTCAACTCGCTTCACGAGAGAAATTGTATGGGAAGTCTGCAAAAGCTGCTGCCAAGATCGAGAAGTGGCTCTTGCCGGCTTCAGCAGGGTACTTGGAGACTGATGGTTTAGAGAAGACGTGGCGGATCAAGCAGACAGATATCGCCAAAGAAGTAGATATATTAAGCTCAAGAAACCAATATGACATTGTGCTCCCAGATTTTGGGCCGTACAAACTTGATTTTACTGCAAGTGGACGGCATATGCTAGCTGGTGGTCGCAAAGGCCACCTTGCTCTTGTAGACATGATGAATATGAACCTAATTAAAGAGATCCAGGTAAGGGAAACAGTACGTGATGTTGCATTCCTGCACAATGACCAATTCTTTGCAGCTGCCCAGAAGAAGTATGCTTATATTTATGGGAGAGATGGAACTGAGCTCCACTGTTTGAAGGAACGTGGTCCAGTGGCTAGACTCAGGTTCCTAAAGAACCATTTCCTGCTTGCATCAGTGAACAAAATCGGACAGCTACATTACCAAGACGTGACCTACGGTGACATGGTAGCTAGTATCCGAACAGGCAAAGGCAGAACAGACGTAATGGAAGTGAACCCTTACAACGGTGTTGTCGCCTTGGGACACTCTGGTGGAACCGTCACGATGTGGAAACCAACTAGCCAAGCACCTCTAGTCCAGATGCAGTGTCACCCTGGTCCAGTCTCCTCTCTCGCCTTCCATCCAAACGGCCATCTCATGGCTACATCGGGCAAAGAGCGCAAAGTCAAGATCTGGGATCTGCGCAAGTTCGAGGAGGTCCAGACCATTCACGGCTTCCACGCCAAGACGCTGAGTTTCAGCCAGAAAGGTTTGCTAGCAGCTGGAACCGGATCGTTTGTTCAGGTTTTAGGAGACTCGAGCGGTGCTTACAGCAGATACATGAGCCACTCGATGGTGAAAGGCTACCAGATCGAGAAGGTTATGTTCAGACCGTACGAGGATGTTCTCGGGATTGGCCACTCGATGGGTTGGTCTAGCGTCCTCATACCAGGGTCTGGAGAACCGAACTTCGATTCTTGGGTGGCTAACCCGTTTGAAACGTCGAAACAGAGACGTGAGAAGGAAGTGCACTTGCTTCTTGATAAGCTCCCACCTGAGACGATCATGCTTGATCCTTCGAAGATAGGTGCGATGAGACCTTCGAGGAGGAAGGAGAAGCCAACGAGAGGAGAGGTGGAAGCTGAGAAAGAGGTGGCGGTAGAAGCAGCGAAGAGCGTTGAGATGAAGAAGAAGACTAAAGGAAGGAACAAACCGAGTAAGAGGACTAAGAAGAAGAAGGAGATGGTGGAGAGTGTAAAGAGGACGTTCCCGGAGCTAGAGCACAGCGCTGCAGGTAAGAAGAGAAGATTAGGTGAAGATGATGCTGCGGCAGAGCTTCCCGCATGTTTGAAAAGATAA
Protein:  
MICYFFRKTLKNYTKPSKSVQSAQVRCRSSSSINTLYISAKTLLKSPPSCVVVSELSSAPPSPNLKAHNASQVKIIQKFQSFSQVTKGIKMEVALEDNNLMEKVVLTPDEQEMDVELEAKEKKYLRGEGANLETLKDKKLKTQLASREKLYGKSAKAAAKIEKWLLPASAGYLETDGLEKTWRIKQTDIAKEVDILSSRNQYDIVLPDFGPYKLDFTASGRHMLAGGRKGHLALVDMMNMNLIKEIQVRETVRDVAFLHNDQFFAAAQKKYAYIYGRDGTELHCLKERGPVARLRFLKNHFLLASVNKIGQLHYQDVTYGDMVASIRTGKGRTDVMEVNPYNGVVALGHSGGTVTMWKPTSQAPLVQMQCHPGPVSSLAFHPNGHLMATSGKERKVKIWDLRKFEEVQTIHGFHAKTLSFSQKGLLAAGTGSFVQVLGDSSGAYSRYMSHSMVKGYQIEKVMFRPYEDVLGIGHSMGWSSVLIPGSGEPNFDSWVANPFETSKQRREKEVHLLLDKLPPETIMLDPSKIGAMRPSRRKEKPTRGEVEAEKEVAVEAAKSVEMKKKTKGRNKPSKRTKKKKEMVESVKRTFPELEHSAAGKKRRLGEDDAAAELPACLKR